Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trdv4Q5R1A3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv4Q5R1A3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Gm8520-201ENSMUST00000186517 868 ntBASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv4Q5R1A3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv4Q5R1A3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trdv4Q5R1A3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Gm13216-201ENSMUST00000117145 591 ntBASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv4Q5R1A3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms