Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm28659-201ENSMUST00000188013 759 ntBASIC15.76■□□□□ 0.11
Urb1Q571H0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.76■□□□□ 0.11
Urb1Q571H0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.76■□□□□ 0.11
Urb1Q571H0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Urb1Q571H0 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.75■□□□□ 0.11
Urb1Q571H0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.75■□□□□ 0.11
Urb1Q571H0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.75■□□□□ 0.11
Urb1Q571H0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Urb1Q571H0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Urb1Q571H0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Urb1Q571H0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Urb1Q571H0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Urb1Q571H0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Urb1Q571H0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Urb1Q571H0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Urb1Q571H0 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.74■□□□□ 0.11
Urb1Q571H0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Urb1Q571H0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Urb1Q571H0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.74■□□□□ 0.11
Urb1Q571H0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Gm45328-201ENSMUST00000210942 917 ntBASIC15.74■□□□□ 0.11
Urb1Q571H0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Urb1Q571H0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Urb1Q571H0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.73■□□□□ 0.11
Urb1Q571H0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.73■□□□□ 0.11
Urb1Q571H0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Urb1Q571H0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.73■□□□□ 0.11
Urb1Q571H0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Urb1Q571H0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Urb1Q571H0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Urb1Q571H0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.73■□□□□ 0.11
Urb1Q571H0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Urb1Q571H0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Urb1Q571H0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Urb1Q571H0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Urb1Q571H0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Urb1Q571H0 Gm15794-201ENSMUST00000120182 631 ntBASIC15.72■□□□□ 0.11
Urb1Q571H0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Urb1Q571H0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Urb1Q571H0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Urb1Q571H0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.72■□□□□ 0.11
Urb1Q571H0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Urb1Q571H0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.72■□□□□ 0.11
Urb1Q571H0 Tgds-204ENSMUST00000228543 1594 ntBASIC15.72■□□□□ 0.11
Urb1Q571H0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Urb1Q571H0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.71■□□□□ 0.11
Urb1Q571H0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Urb1Q571H0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Urb1Q571H0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Urb1Q571H0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.71■□□□□ 0.11
Urb1Q571H0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Urb1Q571H0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.71■□□□□ 0.11
Urb1Q571H0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Urb1Q571H0 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.71■□□□□ 0.11
Urb1Q571H0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Urb1Q571H0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Urb1Q571H0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Urb1Q571H0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Urb1Q571H0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Urb1Q571H0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms