Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snx27Q3UHD6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Snx27Q3UHD6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snx27Q3UHD6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snx27Q3UHD6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.53■□□□□ 0.56
Snx27Q3UHD6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snx27Q3UHD6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Snx27Q3UHD6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Gm37722-201ENSMUST00000193757 208 ntBASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.52■□□□□ 0.56
Snx27Q3UHD6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Snx27Q3UHD6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Snx27Q3UHD6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Snx27Q3UHD6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.52■□□□□ 0.55
Snx27Q3UHD6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.52■□□□□ 0.55
Snx27Q3UHD6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Gm14859-201ENSMUST00000117752 357 ntBASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snx27Q3UHD6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snx27Q3UHD6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Snx27Q3UHD6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Snx27Q3UHD6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Snx27Q3UHD6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Snx27Q3UHD6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Snx27Q3UHD6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms