Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssbp4Q3U4B1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Gm6345-202ENSMUST00000180900 204 ntBASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssbp4Q3U4B1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Grk6-206ENSMUST00000224995 2971 ntBASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ssbp4Q3U4B1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Gm33142-201ENSMUST00000193913 867 ntBASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssbp4Q3U4B1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.39□□□□□ -0.11
Ssbp4Q3U4B1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms