Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Khdc4Q3TCX3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Gm21362-201ENSMUST00000194272 928 ntBASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Khdc4Q3TCX3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Gm27463-201ENSMUST00000183569 57 ntBASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Gm7367-201ENSMUST00000057611 492 ntBASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Khdc4Q3TCX3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Khdc4Q3TCX3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Khdc4Q3TCX3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Gm10819-201ENSMUST00000099988 561 ntBASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Khdc4Q3TCX3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Gm38027-201ENSMUST00000192315 235 ntBASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms