Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.9■□□□□ 0.3
Q3KNL4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q3KNL4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Q3KNL4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Q3KNL4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Q3KNL4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Q3KNL4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.89■□□□□ 0.3
Q3KNL4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Q3KNL4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.89■□□□□ 0.29
Q3KNL4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Q3KNL4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.89■□□□□ 0.29
Q3KNL4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.89■□□□□ 0.29
Q3KNL4 Gm10138-203ENSMUST00000206952 366 ntBASIC16.89■□□□□ 0.29
Q3KNL4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Q3KNL4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.89■□□□□ 0.29
Q3KNL4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Q3KNL4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q3KNL4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.88■□□□□ 0.29
Q3KNL4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.88■□□□□ 0.29
Q3KNL4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Q3KNL4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Q3KNL4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Q3KNL4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q3KNL4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.87■□□□□ 0.29
Q3KNL4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Q3KNL4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q3KNL4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.87■□□□□ 0.29
Q3KNL4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.86■□□□□ 0.29
Q3KNL4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Gm12896-201ENSMUST00000118430 226 ntBASIC16.86■□□□□ 0.29
Q3KNL4 Gm11643-201ENSMUST00000119578 864 ntBASIC16.86■□□□□ 0.29
Q3KNL4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.86■□□□□ 0.29
Q3KNL4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.86■□□□□ 0.29
Q3KNL4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Q3KNL4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Q3KNL4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Q3KNL4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Q3KNL4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.85■□□□□ 0.29
Q3KNL4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.85■□□□□ 0.29
Q3KNL4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.85■□□□□ 0.29
Q3KNL4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.85■□□□□ 0.29
Q3KNL4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms