Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 Q0092Q0092 141 nt-1.72□□□□□ -2.68
RUP1Q12242 Q0143Q0143 153 nt-1.76□□□□□ -2.69
RUP1Q12242 YOR309CYOR309C 381 nt-1.82□□□□□ -2.7
RUP1Q12242 YDL159W-AYDL159W-A 132 nt-1.83□□□□□ -2.7
RUP1Q12242 YDL114W-AYDL114W-A 114 nt-1.84□□□□□ -2.7
RUP1Q12242 tV(UAC)QtV(UAC)Q 76 nt-1.86□□□□□ -2.71
RUP1Q12242 snR64snR64 101 nt-1.9□□□□□ -2.71
RUP1Q12242 YGR122C-AYGR122C-A 129 nt-1.92□□□□□ -2.72
RUP1Q12242 snR6snR6 112 nt-1.93□□□□□ -2.72
RUP1Q12242 YMR326CYMR326C 309 nt-1.94□□□□□ -2.72
RUP1Q12242 YHR217CYHR217C 462 nt-1.98□□□□□ -2.73
RUP1Q12242 YOR335W-AYOR335W-A 81 nt-2□□□□□ -2.73
RUP1Q12242 snR85snR85 171 nt-2.09□□□□□ -2.74
RUP1Q12242 YLL066W-BYLL066W-B 171 nt-2.09□□□□□ -2.74
RUP1Q12242 RPL41BYDL133C-A 78 nt-2.12□□□□□ -2.75
RUP1Q12242 snR73snR73 106 nt-2.14□□□□□ -2.75
RUP1Q12242 YBL109WYBL109W 336 nt-2.14□□□□□ -2.75
RUP1Q12242 YJR162CYJR162C 351 nt-2.31□□□□□ -2.78
RUP1Q12242 snR53snR53 91 nt-2.36□□□□□ -2.79
RUP1Q12242 YDR524C-AYDR524C-A 120 nt-2.46□□□□□ -2.8
RUP1Q12242 YLR149C-AYLR149C-A 87 nt-2.54□□□□□ -2.82
RUP1Q12242 YDL247W-AYDL247W-A 75 nt-2.55□□□□□ -2.82
RUP1Q12242 YKL096C-BYKL096C-B 150 nt-2.58□□□□□ -2.82
RUP1Q12242 snR87snR87 109 nt-2.95□□□□□ -2.88
RUP1Q12242 snR40snR40 97 nt-2.96□□□□□ -2.88
RUP1Q12242 snR58snR58 96 nt-3.03□□□□□ -2.89
RUP1Q12242 tC(GCA)QtC(GCA)Q 76 nt-3.35□□□□□ -2.95
RUP1Q12242 snR75snR75 89 nt-3.78□□□□□ -3.01
RUP1Q12242 YJL136W-AYJL136W-A 84 nt-3.81□□□□□ -3.02
Retrieved 29 of 7,029 protein–RNA pairs in 5.4 ms