Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.81■□□□□ 0.44
IhhP97812 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.81■□□□□ 0.44
IhhP97812 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.81■□□□□ 0.44
IhhP97812 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IhhP97812 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
IhhP97812 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IhhP97812 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Gm18958-201ENSMUST00000174258 762 ntBASIC17.8■□□□□ 0.44
IhhP97812 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.8■□□□□ 0.44
IhhP97812 Gm21559-201ENSMUST00000220638 855 ntBASIC17.8■□□□□ 0.44
IhhP97812 Gm8587-201ENSMUST00000076538 843 ntBASIC17.8■□□□□ 0.44
IhhP97812 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
IhhP97812 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IhhP97812 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.79■□□□□ 0.44
IhhP97812 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IhhP97812 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IhhP97812 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
IhhP97812 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.79■□□□□ 0.44
IhhP97812 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.79■□□□□ 0.44
IhhP97812 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IhhP97812 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.79■□□□□ 0.44
IhhP97812 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
IhhP97812 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
IhhP97812 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.78■□□□□ 0.44
IhhP97812 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Gm10013-201ENSMUST00000106074 672 ntBASIC17.78■□□□□ 0.44
IhhP97812 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IhhP97812 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
IhhP97812 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.78■□□□□ 0.44
IhhP97812 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.78■□□□□ 0.44
IhhP97812 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IhhP97812 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.78■□□□□ 0.44
IhhP97812 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IhhP97812 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.77■□□□□ 0.44
IhhP97812 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
IhhP97812 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 Gm23634-201ENSMUST00000175071 91 ntBASIC17.77■□□□□ 0.44
IhhP97812 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
IhhP97812 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.77■□□□□ 0.44
IhhP97812 Gm18101-201ENSMUST00000215769 548 ntBASIC17.77■□□□□ 0.44
IhhP97812 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IhhP97812 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.77■□□□□ 0.43
IhhP97812 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
IhhP97812 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
IhhP97812 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IhhP97812 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
IhhP97812 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.76■□□□□ 0.43
IhhP97812 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IhhP97812 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms