Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm11452-201ENSMUST00000122376 690 ntBASIC15.79■□□□□ 0.12
Cacna1aP97445 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cacna1aP97445 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.79■□□□□ 0.12
Cacna1aP97445 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.78■□□□□ 0.12
Cacna1aP97445 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.78■□□□□ 0.12
Cacna1aP97445 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.78■□□□□ 0.12
Cacna1aP97445 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.78■□□□□ 0.12
Cacna1aP97445 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.78■□□□□ 0.12
Cacna1aP97445 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cacna1aP97445 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1aP97445 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Cacna1aP97445 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Cacna1aP97445 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cacna1aP97445 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1aP97445 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Cacna1aP97445 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cacna1aP97445 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1aP97445 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1aP97445 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cacna1aP97445 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1aP97445 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1aP97445 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Cacna1aP97445 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1aP97445 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1aP97445 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1aP97445 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.77■□□□□ 0.11
Cacna1aP97445 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1aP97445 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Cacna1aP97445 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Cacna1aP97445 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cacna1aP97445 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cacna1aP97445 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cacna1aP97445 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cacna1aP97445 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.76■□□□□ 0.11
Cacna1aP97445 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.76■□□□□ 0.11
Cacna1aP97445 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.76■□□□□ 0.11
Cacna1aP97445 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cacna1aP97445 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1aP97445 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1aP97445 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Cacna1aP97445 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1aP97445 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1aP97445 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cacna1aP97445 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.75■□□□□ 0.11
Cacna1aP97445 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cacna1aP97445 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms