Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PrkdcP97313 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PrkdcP97313 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkdcP97313 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
PrkdcP97313 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkdcP97313 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkdcP97313 Gm6089-201ENSMUST00000197666 938 ntBASIC11.77□□□□□ -0.52
PrkdcP97313 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.77□□□□□ -0.52
PrkdcP97313 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.77□□□□□ -0.52
PrkdcP97313 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkdcP97313 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PrkdcP97313 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PrkdcP97313 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
PrkdcP97313 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.77□□□□□ -0.53
PrkdcP97313 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PrkdcP97313 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
PrkdcP97313 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
PrkdcP97313 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.76□□□□□ -0.53
PrkdcP97313 Gm9885-202ENSMUST00000186234 2209 ntBASIC11.76□□□□□ -0.53
PrkdcP97313 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
PrkdcP97313 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.76□□□□□ -0.53
PrkdcP97313 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
PrkdcP97313 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PrkdcP97313 AA543401-201ENSMUST00000164248 1269 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
PrkdcP97313 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
PrkdcP97313 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC11.75□□□□□ -0.53
PrkdcP97313 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Gm44450-201ENSMUST00000199528 114 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.75□□□□□ -0.53
PrkdcP97313 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.75□□□□□ -0.53
PrkdcP97313 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
PrkdcP97313 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.75□□□□□ -0.53
PrkdcP97313 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.75□□□□□ -0.53
PrkdcP97313 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Gm43545-201ENSMUST00000196765 2779 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.75□□□□□ -0.53
PrkdcP97313 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.75□□□□□ -0.53
PrkdcP97313 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PrkdcP97313 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.75□□□□□ -0.53
PrkdcP97313 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
PrkdcP97313 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
PrkdcP97313 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.74□□□□□ -0.53
PrkdcP97313 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms