Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.33■□□□□ 0.04
SgcbP82349 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.33■□□□□ 0.04
SgcbP82349 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SgcbP82349 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SgcbP82349 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.32■□□□□ 0.04
SgcbP82349 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SgcbP82349 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SgcbP82349 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.32■□□□□ 0.04
SgcbP82349 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SgcbP82349 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SgcbP82349 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SgcbP82349 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SgcbP82349 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.31■□□□□ 0.04
SgcbP82349 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SgcbP82349 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Gm7638-201ENSMUST00000121348 967 ntBASIC15.31■□□□□ 0.04
SgcbP82349 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.31■□□□□ 0.04
SgcbP82349 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SgcbP82349 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SgcbP82349 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.3■□□□□ 0.04
SgcbP82349 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.3■□□□□ 0.04
SgcbP82349 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.3■□□□□ 0.04
SgcbP82349 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
SgcbP82349 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SgcbP82349 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.29■□□□□ 0.04
SgcbP82349 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SgcbP82349 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SgcbP82349 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SgcbP82349 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SgcbP82349 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Gm8969-201ENSMUST00000199694 526 ntBASIC15.29■□□□□ 0.04
SgcbP82349 Gm43799-201ENSMUST00000201845 579 ntBASIC15.29■□□□□ 0.04
SgcbP82349 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.29■□□□□ 0.04
SgcbP82349 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SgcbP82349 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SgcbP82349 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SgcbP82349 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms