Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ldb1P70662 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ldb1P70662 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ldb1P70662 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ldb1P70662 Gm12085-201ENSMUST00000119263 940 ntBASIC17.09■□□□□ 0.33
Ldb1P70662 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.09■□□□□ 0.33
Ldb1P70662 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.09■□□□□ 0.33
Ldb1P70662 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ldb1P70662 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ldb1P70662 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ldb1P70662 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ldb1P70662 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ldb1P70662 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.08■□□□□ 0.32
Ldb1P70662 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb1P70662 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb1P70662 Gm22240-201ENSMUST00000175225 82 ntBASIC17.08■□□□□ 0.32
Ldb1P70662 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ldb1P70662 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ldb1P70662 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb1P70662 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.08■□□□□ 0.32
Ldb1P70662 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ldb1P70662 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb1P70662 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb1P70662 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ldb1P70662 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ldb1P70662 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.07■□□□□ 0.32
Ldb1P70662 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.07■□□□□ 0.32
Ldb1P70662 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.07■□□□□ 0.32
Ldb1P70662 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ldb1P70662 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.06■□□□□ 0.32
Ldb1P70662 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.06■□□□□ 0.32
Ldb1P70662 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.06■□□□□ 0.32
Ldb1P70662 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ldb1P70662 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Ldb1P70662 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ldb1P70662 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ldb1P70662 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.05■□□□□ 0.32
Ldb1P70662 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.05■□□□□ 0.32
Ldb1P70662 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.05■□□□□ 0.32
Ldb1P70662 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.05■□□□□ 0.32
Ldb1P70662 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.05■□□□□ 0.32
Ldb1P70662 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ldb1P70662 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms