Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim4P70271 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdlim4P70271 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pdlim4P70271 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.26□□□□□ -0.13
Pdlim4P70271 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pdlim4P70271 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.26□□□□□ -0.13
Pdlim4P70271 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pdlim4P70271 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdlim4P70271 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim4P70271 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.25□□□□□ -0.13
Pdlim4P70271 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdlim4P70271 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.25□□□□□ -0.13
Pdlim4P70271 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdlim4P70271 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdlim4P70271 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.25□□□□□ -0.13
Pdlim4P70271 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdlim4P70271 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pdlim4P70271 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pdlim4P70271 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim4P70271 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.24□□□□□ -0.13
Pdlim4P70271 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.24□□□□□ -0.13
Pdlim4P70271 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.24□□□□□ -0.13
Pdlim4P70271 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pdlim4P70271 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pdlim4P70271 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pdlim4P70271 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
Pdlim4P70271 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim4P70271 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms