Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm18671-201ENSMUST00000214826 683 ntBASIC19.72■□□□□ 0.75
Tpm2P58774 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Tpm2P58774 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tpm2P58774 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tpm2P58774 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.71■□□□□ 0.75
Tpm2P58774 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tpm2P58774 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tpm2P58774 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tpm2P58774 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tpm2P58774 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tpm2P58774 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm2P58774 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.7■□□□□ 0.74
Tpm2P58774 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.7■□□□□ 0.74
Tpm2P58774 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.7■□□□□ 0.74
Tpm2P58774 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tpm2P58774 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm2P58774 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.7■□□□□ 0.74
Tpm2P58774 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.69■□□□□ 0.74
Tpm2P58774 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Tpm2P58774 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm2P58774 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm2P58774 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Tpm2P58774 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tpm2P58774 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.69■□□□□ 0.74
Tpm2P58774 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm2P58774 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tpm2P58774 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.68■□□□□ 0.74
Tpm2P58774 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Tpm2P58774 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Tpm2P58774 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tpm2P58774 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.67■□□□□ 0.74
Tpm2P58774 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tpm2P58774 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tpm2P58774 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tpm2P58774 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tpm2P58774 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tpm2P58774 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpm2P58774 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms