Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.9□□□□□ -0.18
Sssca1P56873 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.9□□□□□ -0.18
Sssca1P56873 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Flg-201ENSMUST00000050758 1488 ntBASIC13.9□□□□□ -0.18
Sssca1P56873 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.9□□□□□ -0.18
Sssca1P56873 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sssca1P56873 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sssca1P56873 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sssca1P56873 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sssca1P56873 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Gm7290-201ENSMUST00000104990 617 ntBASIC13.89□□□□□ -0.19
Sssca1P56873 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Sssca1P56873 Gm12918-201ENSMUST00000120234 636 ntBASIC13.89□□□□□ -0.19
Sssca1P56873 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.89□□□□□ -0.19
Sssca1P56873 Gm15710-201ENSMUST00000121821 636 ntBASIC13.89□□□□□ -0.19
Sssca1P56873 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.89□□□□□ -0.19
Sssca1P56873 Gm5075-201ENSMUST00000196916 622 ntBASIC13.89□□□□□ -0.19
Sssca1P56873 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.89□□□□□ -0.19
Sssca1P56873 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.89□□□□□ -0.19
Sssca1P56873 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.89□□□□□ -0.19
Sssca1P56873 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sssca1P56873 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sssca1P56873 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.89□□□□□ -0.19
Sssca1P56873 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sssca1P56873 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.88□□□□□ -0.19
Sssca1P56873 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Sssca1P56873 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Haglr-201ENSMUST00000100000 2085 ntBASIC13.88□□□□□ -0.19
Sssca1P56873 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sssca1P56873 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Gm6211-202ENSMUST00000167849 925 ntBASIC13.88□□□□□ -0.19
Sssca1P56873 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.88□□□□□ -0.19
Sssca1P56873 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Gm5874-201ENSMUST00000096101 508 ntBASIC13.88□□□□□ -0.19
Sssca1P56873 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sssca1P56873 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Sssca1P56873 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.88□□□□□ -0.19
Sssca1P56873 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sssca1P56873 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sssca1P56873 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sssca1P56873 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Sssca1P56873 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sssca1P56873 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.87□□□□□ -0.19
Sssca1P56873 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Sssca1P56873 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.87□□□□□ -0.19
Sssca1P56873 Gm44549-201ENSMUST00000208351 577 ntBASIC13.87□□□□□ -0.19
Sssca1P56873 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.87□□□□□ -0.19
Sssca1P56873 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sssca1P56873 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms