Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Gm22325-201ENSMUST00000158904 308 ntBASIC15.65■□□□□ 0.1
Cdh11P55288 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdh11P55288 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.65■□□□□ 0.1
Cdh11P55288 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdh11P55288 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdh11P55288 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cdh11P55288 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdh11P55288 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.64■□□□□ 0.09
Cdh11P55288 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.64■□□□□ 0.09
Cdh11P55288 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdh11P55288 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Cdh11P55288 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdh11P55288 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdh11P55288 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cdh11P55288 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cdh11P55288 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cdh11P55288 Flg-201ENSMUST00000050758 1488 ntBASIC15.63■□□□□ 0.09
Cdh11P55288 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdh11P55288 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.62■□□□□ 0.09
Cdh11P55288 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.62■□□□□ 0.09
Cdh11P55288 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Cdh11P55288 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdh11P55288 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdh11P55288 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdh11P55288 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.62■□□□□ 0.09
Cdh11P55288 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cdh11P55288 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Cdh11P55288 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cdh11P55288 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Cdh11P55288 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdh11P55288 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh11P55288 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.61■□□□□ 0.09
Cdh11P55288 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdh11P55288 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cdh11P55288 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cdh11P55288 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Gm13158-201ENSMUST00000122007 736 ntBASIC15.61■□□□□ 0.09
Cdh11P55288 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh11P55288 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cdh11P55288 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms