Protein–RNA interactions for Protein: P53978

HEF3, Elongation factor 3B, yeastyeast

Known RBP Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HEF3P53978 YDL159W-AYDL159W-A 132 nt-0.64□□□□□ -2.51
HEF3P53978 YOR316C-AYOR316C-A 210 nt-0.67□□□□□ -2.52
HEF3P53978 snR64snR64 101 nt-0.69□□□□□ -2.52
HEF3P53978 snR77snR77 88 nt-0.69□□□□□ -2.52
HEF3P53978 YGR122C-AYGR122C-A 129 nt-0.75□□□□□ -2.53
HEF3P53978 YDL247W-AYDL247W-A 75 nt-0.8□□□□□ -2.54
HEF3P53978 CDC65tQ(CUG)M 72 nt-0.8□□□□□ -2.54
HEF3P53978 YDL114W-AYDL114W-A 114 nt-0.82□□□□□ -2.54
HEF3P53978 tY(GUA)QtY(GUA)Q 84 nt-0.82□□□□□ -2.54
HEF3P53978 YMR315W-AYMR315W-A 108 nt-0.85□□□□□ -2.55
HEF3P53978 tV(UAC)QtV(UAC)Q 76 nt-0.88□□□□□ -2.55
HEF3P53978 snR53snR53 91 nt-0.97□□□□□ -2.56
HEF3P53978 YBR126W-BYBR126W-B 144 nt-1.03□□□□□ -2.57
HEF3P53978 YOR335W-AYOR335W-A 81 nt-1.06□□□□□ -2.58
HEF3P53978 snR6snR6 112 nt-1.07□□□□□ -2.58
HEF3P53978 YOR309CYOR309C 381 nt-1.1□□□□□ -2.59
HEF3P53978 YLR149C-AYLR149C-A 87 nt-1.12□□□□□ -2.59
HEF3P53978 YDR543CYDR543C 300 nt-1.14□□□□□ -2.59
HEF3P53978 RPL41BYDL133C-A 78 nt-1.18□□□□□ -2.6
HEF3P53978 snR73snR73 106 nt-1.2□□□□□ -2.6
HEF3P53978 YOL166W-AYOL166W-A 156 nt-1.26□□□□□ -2.61
HEF3P53978 YKL096C-BYKL096C-B 150 nt-1.37□□□□□ -2.63
HEF3P53978 snR40snR40 97 nt-1.48□□□□□ -2.65
HEF3P53978 YJR162CYJR162C 351 nt-1.7□□□□□ -2.68
HEF3P53978 snR87snR87 109 nt-1.78□□□□□ -2.69
HEF3P53978 snR58snR58 96 nt-1.8□□□□□ -2.7
HEF3P53978 snR75snR75 89 nt-1.8□□□□□ -2.7
HEF3P53978 tC(GCA)QtC(GCA)Q 76 nt-1.93□□□□□ -2.72
HEF3P53978 YJL136W-AYJL136W-A 84 nt-2.3□□□□□ -2.78
Retrieved 29 of 7,029 protein–RNA pairs in 2.8 ms