Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sox1P53783 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.53■□□□□ 0.4
Sox1P53783 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox1P53783 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Sox1P53783 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox1P53783 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Sox1P53783 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox1P53783 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Sox1P53783 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox1P53783 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Sox1P53783 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.51■□□□□ 0.39
Sox1P53783 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.51■□□□□ 0.39
Sox1P53783 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox1P53783 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.51■□□□□ 0.39
Sox1P53783 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.51■□□□□ 0.39
Sox1P53783 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sox1P53783 Gm15590-201ENSMUST00000078419 552 ntBASIC17.51■□□□□ 0.39
Sox1P53783 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sox1P53783 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox1P53783 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox1P53783 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox1P53783 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Sox1P53783 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.5■□□□□ 0.39
Sox1P53783 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.5■□□□□ 0.39
Sox1P53783 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Sox1P53783 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox1P53783 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox1P53783 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sox1P53783 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sox1P53783 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox1P53783 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox1P53783 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox1P53783 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox1P53783 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox1P53783 Gm9727-201ENSMUST00000161387 555 ntBASIC17.49■□□□□ 0.39
Sox1P53783 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.49■□□□□ 0.39
Sox1P53783 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox1P53783 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox1P53783 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox1P53783 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sox1P53783 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox1P53783 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sox1P53783 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Gm14140-201ENSMUST00000119999 995 ntBASIC17.48■□□□□ 0.39
Sox1P53783 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.48■□□□□ 0.39
Sox1P53783 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sox1P53783 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.48■□□□□ 0.39
Sox1P53783 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.48■□□□□ 0.39
Sox1P53783 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sox1P53783 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox1P53783 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Sox1P53783 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sox1P53783 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox1P53783 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms