Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 tV(UAC)QtV(UAC)Q 76 nt-1.4□□□□□ -2.63
SSU72P53538 YMR326CYMR326C 309 nt-1.4□□□□□ -2.63
SSU72P53538 snR64snR64 101 nt-1.42□□□□□ -2.64
SSU72P53538 YDL159W-AYDL159W-A 132 nt-1.44□□□□□ -2.64
SSU72P53538 YOR309CYOR309C 381 nt-1.44□□□□□ -2.64
SSU72P53538 YGR122C-AYGR122C-A 129 nt-1.45□□□□□ -2.64
SSU72P53538 snR6snR6 112 nt-1.46□□□□□ -2.64
SSU72P53538 YHR217CYHR217C 462 nt-1.48□□□□□ -2.65
SSU72P53538 RPL41BYDL133C-A 78 nt-1.51□□□□□ -2.65
SSU72P53538 snR85snR85 171 nt-1.51□□□□□ -2.65
SSU72P53538 YOR335W-AYOR335W-A 81 nt-1.54□□□□□ -2.66
SSU72P53538 YLL066W-BYLL066W-B 171 nt-1.59□□□□□ -2.66
SSU72P53538 snR73snR73 106 nt-1.61□□□□□ -2.67
SSU72P53538 YBL109WYBL109W 336 nt-1.69□□□□□ -2.68
SSU72P53538 snR53snR53 91 nt-1.73□□□□□ -2.69
SSU72P53538 YDR524C-AYDR524C-A 120 nt-1.84□□□□□ -2.7
SSU72P53538 YDL247W-AYDL247W-A 75 nt-1.87□□□□□ -2.71
SSU72P53538 YKL096C-BYKL096C-B 150 nt-1.9□□□□□ -2.71
SSU72P53538 YLR149C-AYLR149C-A 87 nt-1.9□□□□□ -2.71
SSU72P53538 YBR126W-BYBR126W-B 144 nt-1.93□□□□□ -2.72
SSU72P53538 snR58snR58 96 nt-2.14□□□□□ -2.75
SSU72P53538 snR40snR40 97 nt-2.2□□□□□ -2.76
SSU72P53538 snR87snR87 109 nt-2.25□□□□□ -2.77
SSU72P53538 YDR543CYDR543C 300 nt-2.34□□□□□ -2.78
SSU72P53538 tC(GCA)QtC(GCA)Q 76 nt-2.42□□□□□ -2.8
SSU72P53538 YOL166W-AYOL166W-A 156 nt-2.52□□□□□ -2.81
SSU72P53538 snR75snR75 89 nt-2.78□□□□□ -2.85
SSU72P53538 YJR162CYJR162C 351 nt-3.39□□□□□ -2.95
SSU72P53538 YJL136W-AYJL136W-A 84 nt-3.43□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 96.8 ms