Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YBL109WYBL109W 336 nt-1.08□□□□□ -2.58
VPS4P52917 YMR315W-AYMR315W-A 108 nt-1.12□□□□□ -2.59
VPS4P52917 snR64snR64 101 nt-1.22□□□□□ -2.6
VPS4P52917 YDL159W-AYDL159W-A 132 nt-1.23□□□□□ -2.61
VPS4P52917 YLL066W-BYLL066W-B 171 nt-1.23□□□□□ -2.61
VPS4P52917 YDR524C-AYDR524C-A 120 nt-1.26□□□□□ -2.61
VPS4P52917 tV(UAC)QtV(UAC)Q 76 nt-1.3□□□□□ -2.62
VPS4P52917 tY(GUA)QtY(GUA)Q 84 nt-1.3□□□□□ -2.62
VPS4P52917 snR6snR6 112 nt-1.31□□□□□ -2.62
VPS4P52917 YOR309CYOR309C 381 nt-1.31□□□□□ -2.62
VPS4P52917 YDL114W-AYDL114W-A 114 nt-1.37□□□□□ -2.63
VPS4P52917 YGR122C-AYGR122C-A 129 nt-1.37□□□□□ -2.63
VPS4P52917 YOR335W-AYOR335W-A 81 nt-1.39□□□□□ -2.63
VPS4P52917 YDL247W-AYDL247W-A 75 nt-1.41□□□□□ -2.64
VPS4P52917 snR73snR73 106 nt-1.49□□□□□ -2.65
VPS4P52917 snR53snR53 91 nt-1.57□□□□□ -2.66
VPS4P52917 RPL41BYDL133C-A 78 nt-1.66□□□□□ -2.68
VPS4P52917 YBR126W-BYBR126W-B 144 nt-1.76□□□□□ -2.69
VPS4P52917 YLR149C-AYLR149C-A 87 nt-1.81□□□□□ -2.7
VPS4P52917 YKL096C-BYKL096C-B 150 nt-1.89□□□□□ -2.71
VPS4P52917 snR87snR87 109 nt-2.13□□□□□ -2.75
VPS4P52917 snR40snR40 97 nt-2.16□□□□□ -2.76
VPS4P52917 YDR543CYDR543C 300 nt-2.17□□□□□ -2.76
VPS4P52917 snR58snR58 96 nt-2.32□□□□□ -2.78
VPS4P52917 YOL166W-AYOL166W-A 156 nt-2.47□□□□□ -2.8
VPS4P52917 tC(GCA)QtC(GCA)Q 76 nt-2.53□□□□□ -2.81
VPS4P52917 snR75snR75 89 nt-2.83□□□□□ -2.86
VPS4P52917 YJR162CYJR162C 351 nt-3.06□□□□□ -2.9
VPS4P52917 YJL136W-AYJL136W-A 84 nt-3.45□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 65.2 ms