Protein–RNA interactions for Protein: P48787

Tnni3, Troponin I, cardiac muscle, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnni3P48787 Gm10013-201ENSMUST00000106074 672 ntBASIC18.81■□□□□ 0.6
Tnni3P48787 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Tnni3P48787 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnni3P48787 Gm22697-201ENSMUST00000175194 63 ntBASIC18.81■□□□□ 0.6
Tnni3P48787 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.81■□□□□ 0.6
Tnni3P48787 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.81■□□□□ 0.6
Tnni3P48787 Gm18032-201ENSMUST00000222541 538 ntBASIC18.81■□□□□ 0.6
Tnni3P48787 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnni3P48787 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tnni3P48787 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnni3P48787 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnni3P48787 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnni3P48787 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnni3P48787 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnni3P48787 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnni3P48787 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnni3P48787 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnni3P48787 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.8■□□□□ 0.6
Tnni3P48787 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnni3P48787 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.79■□□□□ 0.6
Tnni3P48787 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnni3P48787 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.79■□□□□ 0.6
Tnni3P48787 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.79■□□□□ 0.6
Tnni3P48787 Gm6659-201ENSMUST00000174752 547 ntBASIC18.79■□□□□ 0.6
Tnni3P48787 Gm18101-201ENSMUST00000215769 548 ntBASIC18.79■□□□□ 0.6
Tnni3P48787 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnni3P48787 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnni3P48787 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Tnni3P48787 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tnni3P48787 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnni3P48787 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tnni3P48787 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnni3P48787 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnni3P48787 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnni3P48787 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnni3P48787 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tnni3P48787 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnni3P48787 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Tnni3P48787 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Tnni3P48787 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnni3P48787 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Tnni3P48787 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnni3P48787 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnni3P48787 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnni3P48787 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnni3P48787 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.76■□□□□ 0.59
Tnni3P48787 Gm8969-201ENSMUST00000199694 526 ntBASIC18.76■□□□□ 0.59
Tnni3P48787 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnni3P48787 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnni3P48787 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Tnni3P48787 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnni3P48787 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnni3P48787 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnni3P48787 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Gm18958-201ENSMUST00000174258 762 ntBASIC18.75■□□□□ 0.59
Tnni3P48787 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tnni3P48787 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnni3P48787 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.75■□□□□ 0.59
Tnni3P48787 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnni3P48787 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tnni3P48787 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms