Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rph3aP47708 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rph3aP47708 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rph3aP47708 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rph3aP47708 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rph3aP47708 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rph3aP47708 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.52■□□□□ 0.24
Rph3aP47708 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rph3aP47708 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rph3aP47708 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.52■□□□□ 0.24
Rph3aP47708 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rph3aP47708 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rph3aP47708 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rph3aP47708 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rph3aP47708 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.52■□□□□ 0.23
Rph3aP47708 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rph3aP47708 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rph3aP47708 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rph3aP47708 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rph3aP47708 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.51■□□□□ 0.23
Rph3aP47708 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.51■□□□□ 0.23
Rph3aP47708 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.51■□□□□ 0.23
Rph3aP47708 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.51■□□□□ 0.23
Rph3aP47708 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rph3aP47708 Gm24841-201ENSMUST00000158676 357 ntBASIC16.51■□□□□ 0.23
Rph3aP47708 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.51■□□□□ 0.23
Rph3aP47708 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.51■□□□□ 0.23
Rph3aP47708 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rph3aP47708 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rph3aP47708 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.51■□□□□ 0.23
Rph3aP47708 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rph3aP47708 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rph3aP47708 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.5■□□□□ 0.23
Rph3aP47708 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.5■□□□□ 0.23
Rph3aP47708 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rph3aP47708 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rph3aP47708 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rph3aP47708 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.49■□□□□ 0.23
Rph3aP47708 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rph3aP47708 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.49■□□□□ 0.23
Rph3aP47708 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rph3aP47708 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.49■□□□□ 0.23
Rph3aP47708 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rph3aP47708 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.49■□□□□ 0.23
Rph3aP47708 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rph3aP47708 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rph3aP47708 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.48■□□□□ 0.23
Rph3aP47708 Timm23-208ENSMUST00000226683 750 ntBASIC16.48■□□□□ 0.23
Rph3aP47708 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rph3aP47708 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rph3aP47708 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Rph3aP47708 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rph3aP47708 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rph3aP47708 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms