Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YGL007C-AYGL007C-A 87 nt-3.25□□□□□ -2.93
VPS55P47111 YGL041C-BYGL041C-B 183 nt-3.3□□□□□ -2.94
VPS55P47111 YLR466C-BYLR466C-B 117 nt-3.3□□□□□ -2.94
VPS55P47111 YNL338WYNL338W 159 nt-3.33□□□□□ -2.94
VPS55P47111 snR58snR58 96 nt-3.36□□□□□ -2.95
VPS55P47111 snR64snR64 101 nt-3.37□□□□□ -2.95
VPS55P47111 snR62snR62 100 nt-3.39□□□□□ -2.95
VPS55P47111 YNL103W-AYNL103W-A 90 nt-3.41□□□□□ -2.96
VPS55P47111 YJR162CYJR162C 351 nt-3.46□□□□□ -2.96
VPS55P47111 YNL170WYNL170W 396 nt-3.48□□□□□ -2.97
VPS55P47111 YLR294CYLR294C 330 nt-3.51□□□□□ -2.97
VPS55P47111 snR61snR61 90 nt-3.52□□□□□ -2.97
VPS55P47111 tM(CAU)Q1tM(CAU)Q1 76 nt-3.55□□□□□ -2.98
VPS55P47111 YOR225WYOR225W 330 nt-3.64□□□□□ -2.99
VPS55P47111 tC(GCA)QtC(GCA)Q 76 nt-3.78□□□□□ -3.01
VPS55P47111 snR40snR40 97 nt-3.81□□□□□ -3.02
VPS55P47111 Q0032Q0032 291 nt-3.85□□□□□ -3.03
VPS55P47111 YJL136W-AYJL136W-A 84 nt-3.88□□□□□ -3.03
VPS55P47111 YLR149C-AYLR149C-A 87 nt-3.89□□□□□ -3.03
VPS55P47111 snR53snR53 91 nt-3.98□□□□□ -3.05
VPS55P47111 YLL066W-BYLL066W-B 171 nt-4.14□□□□□ -3.07
VPS55P47111 YHR217CYHR217C 462 nt-4.37□□□□□ -3.11
VPS55P47111 YMR326CYMR326C 309 nt-4.45□□□□□ -3.12
VPS55P47111 Q0143Q0143 153 nt-4.57□□□□□ -3.14
VPS55P47111 ATP8Q0080 147 nt-4.62□□□□□ -3.15
VPS55P47111 YBL109WYBL109W 336 nt-4.75□□□□□ -3.17
VPS55P47111 YDL247W-AYDL247W-A 75 nt-5.15□□□□□ -3.23
VPS55P47111 Q0092Q0092 141 nt-5.29□□□□□ -3.26
VPS55P47111 snR75snR75 89 nt-5.33□□□□□ -3.26
Retrieved 29 of 7,029 protein–RNA pairs in 6.7 ms