Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 tM(CAU)Q1tM(CAU)Q1 76 nt-4.14□□□□□ -3.07
LSM1P47017 YGL007C-AYGL007C-A 87 nt-4.15□□□□□ -3.07
LSM1P47017 YKL096C-BYKL096C-B 150 nt-4.18□□□□□ -3.08
LSM1P47017 YNL338WYNL338W 159 nt-4.19□□□□□ -3.08
LSM1P47017 YJR162CYJR162C 351 nt-4.21□□□□□ -3.08
LSM1P47017 YGL041C-BYGL041C-B 183 nt-4.23□□□□□ -3.09
LSM1P47017 snR62snR62 100 nt-4.32□□□□□ -3.1
LSM1P47017 snR58snR58 96 nt-4.35□□□□□ -3.11
LSM1P47017 snR64snR64 101 nt-4.38□□□□□ -3.11
LSM1P47017 snR61snR61 90 nt-4.4□□□□□ -3.11
LSM1P47017 YNL103W-AYNL103W-A 90 nt-4.42□□□□□ -3.12
LSM1P47017 YNL170WYNL170W 396 nt-4.49□□□□□ -3.13
LSM1P47017 YLR294CYLR294C 330 nt-4.62□□□□□ -3.15
LSM1P47017 YOR225WYOR225W 330 nt-4.7□□□□□ -3.16
LSM1P47017 Q0032Q0032 291 nt-4.77□□□□□ -3.17
LSM1P47017 tC(GCA)QtC(GCA)Q 76 nt-4.98□□□□□ -3.21
LSM1P47017 snR40snR40 97 nt-5.08□□□□□ -3.22
LSM1P47017 YLR149C-AYLR149C-A 87 nt-5.14□□□□□ -3.23
LSM1P47017 snR53snR53 91 nt-5.14□□□□□ -3.23
LSM1P47017 YLL066W-BYLL066W-B 171 nt-5.37□□□□□ -3.27
LSM1P47017 YJL136W-AYJL136W-A 84 nt-5.39□□□□□ -3.27
LSM1P47017 YMR326CYMR326C 309 nt-5.54□□□□□ -3.3
LSM1P47017 YHR217CYHR217C 462 nt-5.55□□□□□ -3.3
LSM1P47017 ATP8Q0080 147 nt-5.81□□□□□ -3.34
LSM1P47017 Q0143Q0143 153 nt-5.81□□□□□ -3.34
LSM1P47017 YBL109WYBL109W 336 nt-6.26□□□□□ -3.41
LSM1P47017 YDL247W-AYDL247W-A 75 nt-6.47□□□□□ -3.45
LSM1P47017 Q0092Q0092 141 nt-6.65□□□□□ -3.47
LSM1P47017 snR75snR75 89 nt-6.96□□□□□ -3.52
Retrieved 29 of 7,029 protein–RNA pairs in 34.9 ms