Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp9P41245 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Mmp9P41245 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Mmp9P41245 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Mmp9P41245 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Mmp9P41245 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Gm13216-201ENSMUST00000117145 591 ntBASIC14.42□□□□□ -0.1
Mmp9P41245 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Mmp9P41245 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.42□□□□□ -0.1
Mmp9P41245 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Mmp9P41245 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.42□□□□□ -0.1
Mmp9P41245 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mmp9P41245 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Mmp9P41245 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Mmp9P41245 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Mmp9P41245 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.41□□□□□ -0.1
Mmp9P41245 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.41□□□□□ -0.1
Mmp9P41245 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Mmp9P41245 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.41□□□□□ -0.1
Mmp9P41245 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.41□□□□□ -0.1
Mmp9P41245 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Mmp9P41245 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Mmp9P41245 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Mmp9P41245 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mmp9P41245 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Mmp9P41245 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Mmp9P41245 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.4□□□□□ -0.1
Mmp9P41245 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.4□□□□□ -0.1
Mmp9P41245 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.4□□□□□ -0.1
Mmp9P41245 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Mmp9P41245 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Mmp9P41245 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mmp9P41245 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Mmp9P41245 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.39□□□□□ -0.11
Mmp9P41245 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mmp9P41245 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Mmp9P41245 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms