Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 snR85snR85 171 nt-2.48□□□□□ -2.81
CDC40P40968 YNL103W-AYNL103W-A 90 nt-2.54□□□□□ -2.82
CDC40P40968 snR61snR61 90 nt-2.57□□□□□ -2.82
CDC40P40968 YDR034C-AYDR034C-A 177 nt-2.61□□□□□ -2.83
CDC40P40968 snR87snR87 109 nt-2.7□□□□□ -2.84
CDC40P40968 snR62snR62 100 nt-2.75□□□□□ -2.85
CDC40P40968 YDL159W-AYDL159W-A 132 nt-2.75□□□□□ -2.85
CDC40P40968 YGR122C-AYGR122C-A 129 nt-2.75□□□□□ -2.85
CDC40P40968 YLR294CYLR294C 330 nt-2.77□□□□□ -2.85
CDC40P40968 YNL170WYNL170W 396 nt-2.79□□□□□ -2.86
CDC40P40968 YKL096C-BYKL096C-B 150 nt-2.81□□□□□ -2.86
CDC40P40968 YJR162CYJR162C 351 nt-2.92□□□□□ -2.88
CDC40P40968 YOR225WYOR225W 330 nt-2.92□□□□□ -2.88
CDC40P40968 snR64snR64 101 nt-2.95□□□□□ -2.88
CDC40P40968 snR58snR58 96 nt-2.98□□□□□ -2.89
CDC40P40968 ATP8Q0080 147 nt-3.15□□□□□ -2.91
CDC40P40968 YMR326CYMR326C 309 nt-3.37□□□□□ -2.95
CDC40P40968 tC(GCA)QtC(GCA)Q 76 nt-3.38□□□□□ -2.95
CDC40P40968 Q0143Q0143 153 nt-3.41□□□□□ -2.96
CDC40P40968 snR40snR40 97 nt-3.43□□□□□ -2.96
CDC40P40968 YHR217CYHR217C 462 nt-3.44□□□□□ -2.96
CDC40P40968 YLL066W-BYLL066W-B 171 nt-3.45□□□□□ -2.96
CDC40P40968 YLR149C-AYLR149C-A 87 nt-3.48□□□□□ -2.97
CDC40P40968 snR53snR53 91 nt-3.51□□□□□ -2.97
CDC40P40968 YJL136W-AYJL136W-A 84 nt-3.59□□□□□ -2.98
CDC40P40968 Q0092Q0092 141 nt-3.64□□□□□ -2.99
CDC40P40968 YBL109WYBL109W 336 nt-3.86□□□□□ -3.03
CDC40P40968 YDL247W-AYDL247W-A 75 nt-4.11□□□□□ -3.07
CDC40P40968 snR75snR75 89 nt-4.73□□□□□ -3.17
Retrieved 29 of 7,029 protein–RNA pairs in 6.3 ms