Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeast

Known RBP RIP-Chip data

Length 250 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	P40561	snR85	snR85	171 nt		-1.47	□□□□□ -2.64
SGN1	P40561	YMR315W-A	YMR315W-A	108 nt		-1.5	□□□□□ -2.65
SGN1	P40561	snR64	snR64	101 nt		-1.56	□□□□□ -2.66
SGN1	P40561	YDL114W-A	YDL114W-A	114 nt		-1.6	□□□□□ -2.67
SGN1	P40561	YBR126W-B	YBR126W-B	144 nt		-1.64	□□□□□ -2.67
SGN1	P40561	YGR122C-A	YGR122C-A	129 nt		-1.68	□□□□□ -2.68
SGN1	P40561	YLL066W-B	YLL066W-B	171 nt		-1.71	□□□□□ -2.68
SGN1	P40561	tV(UAC)Q	tV(UAC)Q	76 nt		-1.72	□□□□□ -2.68
SGN1	P40561	YBL109W	YBL109W	336 nt		-1.73	□□□□□ -2.69
SGN1	P40561	YDL159W-A	YDL159W-A	132 nt		-1.78	□□□□□ -2.69
SGN1	P40561	YDR524C-A	YDR524C-A	120 nt		-1.83	□□□□□ -2.7
SGN1	P40561	YDL247W-A	YDL247W-A	75 nt		-1.85	□□□□□ -2.71
SGN1	P40561	RPL41B	YDL133C-A	78 nt		-1.86	□□□□□ -2.71
SGN1	P40561	YOR309C	YOR309C	381 nt		-1.91	□□□□□ -2.72
SGN1	P40561	snR53	snR53	91 nt		-1.93	□□□□□ -2.72
SGN1	P40561	snR6	snR6	112 nt		-1.95	□□□□□ -2.72
SGN1	P40561	YOR335W-A	YOR335W-A	81 nt		-2.02	□□□□□ -2.73
SGN1	P40561	YDR543C	YDR543C	300 nt		-2.04	□□□□□ -2.74
SGN1	P40561	YOL166W-A	YOL166W-A	156 nt		-2.06	□□□□□ -2.74
SGN1	P40561	snR73	snR73	106 nt		-2.14	□□□□□ -2.75
SGN1	P40561	YLR149C-A	YLR149C-A	87 nt		-2.27	□□□□□ -2.77
SGN1	P40561	YKL096C-B	YKL096C-B	150 nt		-2.41	□□□□□ -2.8
SGN1	P40561	snR58	snR58	96 nt		-2.71	□□□□□ -2.84
SGN1	P40561	snR40	snR40	97 nt		-2.75	□□□□□ -2.85
SGN1	P40561	YJR162C	YJR162C	351 nt		-2.83	□□□□□ -2.86
SGN1	P40561	snR87	snR87	109 nt		-3.04	□□□□□ -2.9
SGN1	P40561	tC(GCA)Q	tC(GCA)Q	76 nt		-3.04	□□□□□ -2.9
SGN1	P40561	snR75	snR75	89 nt		-3.33	□□□□□ -2.94
SGN1	P40561	YJL136W-A	YJL136W-A	84 nt		-3.73	□□□□□ -3.01

Retrieved 29 of 7,029 protein–RNA pairs in 3.2 ms