Protein–RNA interactions for Protein: P39986

SPF1, Manganese-transporting ATPase 1, yeastyeast

Known RBP Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPF1P39986 snR33snR33 183 nt-0.72□□□□□ -2.52
SPF1P39986 snR77snR77 88 nt-0.74□□□□□ -2.53
SPF1P39986 tV(UAC)QtV(UAC)Q 76 nt-0.79□□□□□ -2.54
SPF1P39986 YLR149C-AYLR149C-A 87 nt-0.84□□□□□ -2.54
SPF1P39986 tT(UGU)G1tT(UGU)G1 72 nt-0.85□□□□□ -2.55
SPF1P39986 tT(UGU)G2tT(UGU)G2 72 nt-0.85□□□□□ -2.55
SPF1P39986 tT(UGU)PtT(UGU)P 72 nt-0.85□□□□□ -2.55
SPF1P39986 tP(UGG)QtP(UGG)Q 72 nt-0.97□□□□□ -2.56
SPF1P39986 YNR077CYNR077C 255 nt-0.98□□□□□ -2.57
SPF1P39986 CDC65tQ(CUG)M 72 nt-1.05□□□□□ -2.58
SPF1P39986 YKL096C-BYKL096C-B 150 nt-1.11□□□□□ -2.59
SPF1P39986 YBR223W-AYBR223W-A 120 nt-1.12□□□□□ -2.59
SPF1P39986 YMR315W-AYMR315W-A 108 nt-1.21□□□□□ -2.6
SPF1P39986 RPL41BYDL133C-A 78 nt-1.32□□□□□ -2.62
SPF1P39986 tY(GUA)QtY(GUA)Q 84 nt-1.36□□□□□ -2.63
SPF1P39986 snR6snR6 112 nt-1.38□□□□□ -2.63
SPF1P39986 YOR335W-AYOR335W-A 81 nt-1.42□□□□□ -2.64
SPF1P39986 snR73snR73 106 nt-1.61□□□□□ -2.67
SPF1P39986 YOR309CYOR309C 381 nt-1.64□□□□□ -2.67
SPF1P39986 snR40snR40 97 nt-1.64□□□□□ -2.67
SPF1P39986 snR75snR75 89 nt-1.65□□□□□ -2.67
SPF1P39986 YBR126W-BYBR126W-B 144 nt-2.02□□□□□ -2.73
SPF1P39986 snR58snR58 96 nt-2.09□□□□□ -2.74
SPF1P39986 tC(GCA)QtC(GCA)Q 76 nt-2.27□□□□□ -2.77
SPF1P39986 YOL166W-AYOL166W-A 156 nt-2.52□□□□□ -2.81
SPF1P39986 snR87snR87 109 nt-2.55□□□□□ -2.82
SPF1P39986 YDR543CYDR543C 300 nt-2.59□□□□□ -2.82
SPF1P39986 YJL136W-AYJL136W-A 84 nt-3.73□□□□□ -3.01
SPF1P39986 YJR162CYJR162C 351 nt-3.78□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 25.6 ms