Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 snR61snR61 90 nt-3.23□□□□□ -2.93
CUE1P38428 YGL007C-AYGL007C-A 87 nt-3.24□□□□□ -2.93
CUE1P38428 YNL103W-AYNL103W-A 90 nt-3.24□□□□□ -2.93
CUE1P38428 snR62snR62 100 nt-3.3□□□□□ -2.94
CUE1P38428 YGR122C-AYGR122C-A 129 nt-3.34□□□□□ -2.94
CUE1P38428 YJR162CYJR162C 351 nt-3.34□□□□□ -2.94
CUE1P38428 YDL159W-AYDL159W-A 132 nt-3.36□□□□□ -2.95
CUE1P38428 YNL170WYNL170W 396 nt-3.44□□□□□ -2.96
CUE1P38428 snR64snR64 101 nt-3.48□□□□□ -2.97
CUE1P38428 YDR524C-AYDR524C-A 120 nt-3.58□□□□□ -2.98
CUE1P38428 YKL096C-BYKL096C-B 150 nt-3.71□□□□□ -3
CUE1P38428 YLR294CYLR294C 330 nt-3.75□□□□□ -3.01
CUE1P38428 YOR225WYOR225W 330 nt-3.85□□□□□ -3.03
CUE1P38428 snR87snR87 109 nt-3.87□□□□□ -3.03
CUE1P38428 snR58snR58 96 nt-4□□□□□ -3.05
CUE1P38428 ATP8Q0080 147 nt-4.08□□□□□ -3.06
CUE1P38428 snR53snR53 91 nt-4.12□□□□□ -3.07
CUE1P38428 YHR217CYHR217C 462 nt-4.18□□□□□ -3.08
CUE1P38428 YLL066W-BYLL066W-B 171 nt-4.18□□□□□ -3.08
CUE1P38428 YMR326CYMR326C 309 nt-4.19□□□□□ -3.08
CUE1P38428 YLR149C-AYLR149C-A 87 nt-4.24□□□□□ -3.09
CUE1P38428 Q0143Q0143 153 nt-4.25□□□□□ -3.09
CUE1P38428 snR40snR40 97 nt-4.44□□□□□ -3.12
CUE1P38428 tC(GCA)QtC(GCA)Q 76 nt-4.52□□□□□ -3.13
CUE1P38428 YBL109WYBL109W 336 nt-4.69□□□□□ -3.16
CUE1P38428 Q0092Q0092 141 nt-4.72□□□□□ -3.17
CUE1P38428 YDL247W-AYDL247W-A 75 nt-5.01□□□□□ -3.21
CUE1P38428 YJL136W-AYJL136W-A 84 nt-5.16□□□□□ -3.24
CUE1P38428 snR75snR75 89 nt-5.93□□□□□ -3.36
Retrieved 29 of 7,029 protein–RNA pairs in 6.8 ms