Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a11P31650 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a11P31650 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a11P31650 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a11P31650 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Slc6a11P31650 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
Slc6a11P31650 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.3■□□□□ 0.2
Slc6a11P31650 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.3■□□□□ 0.2
Slc6a11P31650 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Slc6a11P31650 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a11P31650 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc6a11P31650 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.29■□□□□ 0.2
Slc6a11P31650 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc6a11P31650 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a11P31650 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.29■□□□□ 0.2
Slc6a11P31650 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a11P31650 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.28■□□□□ 0.2
Slc6a11P31650 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Haglr-201ENSMUST00000100000 2085 ntBASIC16.28■□□□□ 0.2
Slc6a11P31650 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.28■□□□□ 0.2
Slc6a11P31650 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Gm15378-201ENSMUST00000121894 207 ntBASIC16.28■□□□□ 0.2
Slc6a11P31650 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Slc6a11P31650 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.28■□□□□ 0.2
Slc6a11P31650 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Zfp783-201ENSMUST00000095946 670 ntBASIC16.28■□□□□ 0.2
Slc6a11P31650 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a11P31650 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a11P31650 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Slc6a11P31650 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a11P31650 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a11P31650 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a11P31650 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a11P31650 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a11P31650 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Slc6a11P31650 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Slc6a11P31650 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Slc6a11P31650 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc6a11P31650 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Slc6a11P31650 Gm10418-201ENSMUST00000100943 576 ntBASIC16.26■□□□□ 0.19
Slc6a11P31650 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.26■□□□□ 0.19
Slc6a11P31650 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.26■□□□□ 0.19
Slc6a11P31650 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.26■□□□□ 0.19
Slc6a11P31650 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a11P31650 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms