Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Gm6659-201ENSMUST00000174752 547 ntBASIC14.32□□□□□ -0.12
Col8a2P25318 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Col8a2P25318 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col8a2P25318 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col8a2P25318 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col8a2P25318 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.31□□□□□ -0.12
Col8a2P25318 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Col8a2P25318 Gm37025-201ENSMUST00000195159 829 ntBASIC14.31□□□□□ -0.12
Col8a2P25318 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.31□□□□□ -0.12
Col8a2P25318 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Col8a2P25318 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col8a2P25318 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col8a2P25318 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col8a2P25318 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col8a2P25318 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.3□□□□□ -0.12
Col8a2P25318 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.3□□□□□ -0.12
Col8a2P25318 Gm17661-201ENSMUST00000170317 270 ntBASIC14.3□□□□□ -0.12
Col8a2P25318 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col8a2P25318 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Il3ra-202ENSMUST00000223589 738 ntBASIC14.3□□□□□ -0.12
Col8a2P25318 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Col8a2P25318 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Col8a2P25318 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.3□□□□□ -0.12
Col8a2P25318 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Col8a2P25318 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col8a2P25318 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Col8a2P25318 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.29□□□□□ -0.12
Col8a2P25318 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.29□□□□□ -0.12
Col8a2P25318 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col8a2P25318 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col8a2P25318 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col8a2P25318 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col8a2P25318 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col8a2P25318 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col8a2P25318 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.28□□□□□ -0.12
Col8a2P25318 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Gm22697-201ENSMUST00000175194 63 ntBASIC14.28□□□□□ -0.12
Col8a2P25318 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.28□□□□□ -0.12
Col8a2P25318 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col8a2P25318 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms