Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 tP(UGG)QtP(UGG)Q 72 nt-1.19□□□□□ -2.6
VMA16P23968 YLL066W-BYLL066W-B 171 nt-1.22□□□□□ -2.6
VMA16P23968 YNR077CYNR077C 255 nt-1.22□□□□□ -2.6
VMA16P23968 YDR524C-AYDR524C-A 120 nt-1.24□□□□□ -2.61
VMA16P23968 YDL159W-AYDL159W-A 132 nt-1.3□□□□□ -2.62
VMA16P23968 tV(UAC)QtV(UAC)Q 76 nt-1.34□□□□□ -2.62
VMA16P23968 YDL114W-AYDL114W-A 114 nt-1.35□□□□□ -2.63
VMA16P23968 YGR122C-AYGR122C-A 129 nt-1.36□□□□□ -2.63
VMA16P23968 YMR315W-AYMR315W-A 108 nt-1.38□□□□□ -2.63
VMA16P23968 YDL247W-AYDL247W-A 75 nt-1.4□□□□□ -2.63
VMA16P23968 snR53snR53 91 nt-1.49□□□□□ -2.65
VMA16P23968 snR6snR6 112 nt-1.6□□□□□ -2.67
VMA16P23968 tY(GUA)QtY(GUA)Q 84 nt-1.6□□□□□ -2.67
VMA16P23968 YOR335W-AYOR335W-A 81 nt-1.71□□□□□ -2.68
VMA16P23968 YOR309CYOR309C 381 nt-1.73□□□□□ -2.69
VMA16P23968 RPL41BYDL133C-A 78 nt-1.78□□□□□ -2.69
VMA16P23968 YLR149C-AYLR149C-A 87 nt-1.78□□□□□ -2.69
VMA16P23968 snR73snR73 106 nt-1.83□□□□□ -2.7
VMA16P23968 YKL096C-BYKL096C-B 150 nt-2.12□□□□□ -2.75
VMA16P23968 YBR126W-BYBR126W-B 144 nt-2.24□□□□□ -2.77
VMA16P23968 snR40snR40 97 nt-2.36□□□□□ -2.79
VMA16P23968 snR58snR58 96 nt-2.53□□□□□ -2.81
VMA16P23968 snR87snR87 109 nt-2.7□□□□□ -2.84
VMA16P23968 YDR543CYDR543C 300 nt-2.7□□□□□ -2.84
VMA16P23968 tC(GCA)QtC(GCA)Q 76 nt-2.79□□□□□ -2.86
VMA16P23968 snR75snR75 89 nt-2.86□□□□□ -2.87
VMA16P23968 YOL166W-AYOL166W-A 156 nt-2.89□□□□□ -2.87
VMA16P23968 YJR162CYJR162C 351 nt-3.82□□□□□ -3.02
VMA16P23968 YJL136W-AYJL136W-A 84 nt-4.47□□□□□ -3.13
Retrieved 29 of 7,029 protein–RNA pairs in 4.1 ms