Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 YNL103W-AYNL103W-A 90 nt-2.68□□□□□ -2.84
VPS3P23643 YDR524C-AYDR524C-A 120 nt-2.69□□□□□ -2.84
VPS3P23643 YDR034C-AYDR034C-A 177 nt-2.71□□□□□ -2.84
VPS3P23643 snR62snR62 100 nt-2.79□□□□□ -2.86
VPS3P23643 snR85snR85 171 nt-2.79□□□□□ -2.86
VPS3P23643 YGR122C-AYGR122C-A 129 nt-2.88□□□□□ -2.87
VPS3P23643 YDL159W-AYDL159W-A 132 nt-2.9□□□□□ -2.87
VPS3P23643 YNL170WYNL170W 396 nt-2.9□□□□□ -2.87
VPS3P23643 YLR294CYLR294C 330 nt-2.98□□□□□ -2.89
VPS3P23643 snR64snR64 101 nt-2.99□□□□□ -2.89
VPS3P23643 snR87snR87 109 nt-3.04□□□□□ -2.9
VPS3P23643 YOR225WYOR225W 330 nt-3.06□□□□□ -2.9
VPS3P23643 YJR162CYJR162C 351 nt-3.29□□□□□ -2.94
VPS3P23643 ATP8Q0080 147 nt-3.32□□□□□ -2.94
VPS3P23643 YKL096C-BYKL096C-B 150 nt-3.32□□□□□ -2.94
VPS3P23643 snR58snR58 96 nt-3.47□□□□□ -2.96
VPS3P23643 YHR217CYHR217C 462 nt-3.51□□□□□ -2.97
VPS3P23643 Q0143Q0143 153 nt-3.53□□□□□ -2.97
VPS3P23643 YMR326CYMR326C 309 nt-3.53□□□□□ -2.97
VPS3P23643 YLL066W-BYLL066W-B 171 nt-3.54□□□□□ -2.98
VPS3P23643 snR53snR53 91 nt-3.56□□□□□ -2.98
VPS3P23643 YLR149C-AYLR149C-A 87 nt-3.71□□□□□ -3
VPS3P23643 YJL136W-AYJL136W-A 84 nt-3.8□□□□□ -3.02
VPS3P23643 Q0092Q0092 141 nt-3.85□□□□□ -3.03
VPS3P23643 YBL109WYBL109W 336 nt-3.92□□□□□ -3.04
VPS3P23643 snR40snR40 97 nt-3.94□□□□□ -3.04
VPS3P23643 tC(GCA)QtC(GCA)Q 76 nt-3.96□□□□□ -3.04
VPS3P23643 YDL247W-AYDL247W-A 75 nt-4.24□□□□□ -3.09
VPS3P23643 snR75snR75 89 nt-5.21□□□□□ -3.24
Retrieved 29 of 7,029 protein–RNA pairs in 3.6 ms