Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeastyeast

Known RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM1P17536 snR85snR85 171 nt-3.5□□□□□ -2.97
TPM1P17536 YDR034C-AYDR034C-A 177 nt-3.5□□□□□ -2.97
TPM1P17536 YNL103W-AYNL103W-A 90 nt-3.51□□□□□ -2.97
TPM1P17536 snR62snR62 100 nt-3.65□□□□□ -2.99
TPM1P17536 YOL166W-AYOL166W-A 156 nt-3.71□□□□□ -3
TPM1P17536 snR87snR87 109 nt-3.72□□□□□ -3
TPM1P17536 YGR122C-AYGR122C-A 129 nt-3.74□□□□□ -3.01
TPM1P17536 YDL159W-AYDL159W-A 132 nt-3.78□□□□□ -3.01
TPM1P17536 YNL170WYNL170W 396 nt-3.78□□□□□ -3.01
TPM1P17536 snR64snR64 101 nt-3.89□□□□□ -3.03
TPM1P17536 YKL096C-BYKL096C-B 150 nt-3.93□□□□□ -3.04
TPM1P17536 YLR294CYLR294C 330 nt-3.97□□□□□ -3.04
TPM1P17536 YOR225WYOR225W 330 nt-4.18□□□□□ -3.08
TPM1P17536 snR58snR58 96 nt-4.23□□□□□ -3.09
TPM1P17536 ATP8Q0080 147 nt-4.38□□□□□ -3.11
TPM1P17536 YJR162CYJR162C 351 nt-4.43□□□□□ -3.12
TPM1P17536 YMR326CYMR326C 309 nt-4.48□□□□□ -3.13
TPM1P17536 YHR217CYHR217C 462 nt-4.61□□□□□ -3.15
TPM1P17536 YLL066W-BYLL066W-B 171 nt-4.61□□□□□ -3.15
TPM1P17536 Q0143Q0143 153 nt-4.64□□□□□ -3.15
TPM1P17536 snR53snR53 91 nt-4.66□□□□□ -3.16
TPM1P17536 tC(GCA)QtC(GCA)Q 76 nt-4.78□□□□□ -3.17
TPM1P17536 snR40snR40 97 nt-4.79□□□□□ -3.18
TPM1P17536 YLR149C-AYLR149C-A 87 nt-4.87□□□□□ -3.19
TPM1P17536 YJL136W-AYJL136W-A 84 nt-4.9□□□□□ -3.19
TPM1P17536 Q0092Q0092 141 nt-5.05□□□□□ -3.22
TPM1P17536 YBL109WYBL109W 336 nt-5.28□□□□□ -3.25
TPM1P17536 YDL247W-AYDL247W-A 75 nt-5.44□□□□□ -3.28
TPM1P17536 snR75snR75 89 nt-6.67□□□□□ -3.48
Retrieved 29 of 7,029 protein–RNA pairs in 5.9 ms