Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ank2-226ENSMUST00000189368 339 ntBASIC17.55■□□□□ 0.4
Hmga1P17095 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hmga1P17095 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.55■□□□□ 0.4
Hmga1P17095 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmga1P17095 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hmga1P17095 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmga1P17095 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmga1P17095 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hmga1P17095 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmga1P17095 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmga1P17095 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmga1P17095 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmga1P17095 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.54■□□□□ 0.4
Hmga1P17095 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmga1P17095 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hmga1P17095 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hmga1P17095 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Gm14859-201ENSMUST00000117752 357 ntBASIC17.53■□□□□ 0.4
Hmga1P17095 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Hmga1P17095 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hmga1P17095 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hmga1P17095 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmga1P17095 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hmga1P17095 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.52■□□□□ 0.4
Hmga1P17095 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Mir770-201ENSMUST00000103252 94 ntBASIC17.52■□□□□ 0.4
Hmga1P17095 Gm13186-201ENSMUST00000118031 316 ntBASIC17.52■□□□□ 0.4
Hmga1P17095 Gm11950-201ENSMUST00000121615 838 ntBASIC17.52■□□□□ 0.4
Hmga1P17095 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Hmga1P17095 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.52■□□□□ 0.4
Hmga1P17095 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hmga1P17095 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmga1P17095 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.52■□□□□ 0.4
Hmga1P17095 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.52■□□□□ 0.39
Hmga1P17095 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmga1P17095 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmga1P17095 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmga1P17095 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmga1P17095 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.51■□□□□ 0.39
Hmga1P17095 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmga1P17095 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmga1P17095 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmga1P17095 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmga1P17095 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmga1P17095 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.51■□□□□ 0.39
Hmga1P17095 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.5■□□□□ 0.39
Hmga1P17095 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga1P17095 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga1P17095 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga1P17095 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmga1P17095 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Hmga1P17095 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms