Protein–RNA interactions for Protein: P05977

Myl1, Myosin light chain 1/3, skeletal muscle isoform, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Myl1P05977 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Myl1P05977 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Myl1P05977 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Myl1P05977 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Myl1P05977 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Myl1P05977 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Myl1P05977 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Myl1P05977 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.31■□□□□ 0.52
Myl1P05977 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.31■□□□□ 0.52
Myl1P05977 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.31■□□□□ 0.52
Myl1P05977 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Myl1P05977 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Myl1P05977 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.3■□□□□ 0.52
Myl1P05977 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Myl1P05977 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Myl1P05977 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.3■□□□□ 0.52
Myl1P05977 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Myl1P05977 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.29■□□□□ 0.52
Myl1P05977 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.29■□□□□ 0.52
Myl1P05977 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Myl1P05977 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Myl1P05977 Gm27463-201ENSMUST00000183569 57 ntBASIC18.29■□□□□ 0.52
Myl1P05977 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.29■□□□□ 0.52
Myl1P05977 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.29■□□□□ 0.52
Myl1P05977 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Myl1P05977 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Myl1P05977 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Myl1P05977 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Myl1P05977 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.29■□□□□ 0.52
Myl1P05977 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Myl1P05977 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.28■□□□□ 0.52
Myl1P05977 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Myl1P05977 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Myl1P05977 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.28■□□□□ 0.52
Myl1P05977 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Myl1P05977 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Myl1P05977 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Myl1P05977 Gm13559-201ENSMUST00000120476 863 ntBASIC18.28■□□□□ 0.52
Myl1P05977 Gm13836-201ENSMUST00000121159 501 ntBASIC18.28■□□□□ 0.52
Myl1P05977 Mir8112-201ENSMUST00000184382 131 ntBASIC18.28■□□□□ 0.52
Myl1P05977 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Myl1P05977 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.28■□□□□ 0.52
Myl1P05977 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Myl1P05977 Gm9987-201ENSMUST00000069768 567 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms