Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tp53P02340 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tp53P02340 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.55■□□□□ 0.56
Tp53P02340 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.55■□□□□ 0.56
Tp53P02340 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tp53P02340 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tp53P02340 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tp53P02340 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tp53P02340 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tp53P02340 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tp53P02340 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Tp53P02340 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.54■□□□□ 0.56
Tp53P02340 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Tp53P02340 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.54■□□□□ 0.56
Tp53P02340 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.54■□□□□ 0.56
Tp53P02340 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.54■□□□□ 0.56
Tp53P02340 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Tp53P02340 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Tp53P02340 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tp53P02340 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tp53P02340 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.53■□□□□ 0.56
Tp53P02340 Gm7791-201ENSMUST00000219066 539 ntBASIC18.53■□□□□ 0.56
Tp53P02340 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.53■□□□□ 0.56
Tp53P02340 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tp53P02340 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tp53P02340 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Tp53P02340 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tp53P02340 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Tp53P02340 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tp53P02340 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Tp53P02340 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tp53P02340 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tp53P02340 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.51■□□□□ 0.55
Tp53P02340 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.51■□□□□ 0.55
Tp53P02340 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tp53P02340 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.5■□□□□ 0.55
Tp53P02340 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.5■□□□□ 0.55
Tp53P02340 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tp53P02340 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tp53P02340 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tp53P02340 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms