Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NgfP01139 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Gm15794-201ENSMUST00000120182 631 ntBASIC15.16■□□□□ 0.02
NgfP01139 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.16■□□□□ 0.02
NgfP01139 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.16■□□□□ 0.02
NgfP01139 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NgfP01139 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.16■□□□□ 0.02
NgfP01139 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NgfP01139 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NgfP01139 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.15■□□□□ 0.02
NgfP01139 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.15■□□□□ 0.02
NgfP01139 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NgfP01139 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.15■□□□□ 0.02
NgfP01139 Gm18115-201ENSMUST00000221209 621 ntBASIC15.15■□□□□ 0.02
NgfP01139 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
NgfP01139 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NgfP01139 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.15■□□□□ 0.02
NgfP01139 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NgfP01139 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NgfP01139 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NgfP01139 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.13■□□□□ 0.01
NgfP01139 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NgfP01139 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.13■□□□□ 0.01
NgfP01139 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NgfP01139 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.13■□□□□ 0.01
NgfP01139 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NgfP01139 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NgfP01139 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NgfP01139 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NgfP01139 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.12■□□□□ 0.01
NgfP01139 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NgfP01139 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.12■□□□□ 0.01
NgfP01139 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NgfP01139 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NgfP01139 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.12■□□□□ 0.01
NgfP01139 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.12■□□□□ 0.01
NgfP01139 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.12■□□□□ 0.01
NgfP01139 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NgfP01139 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.12■□□□□ 0.01
NgfP01139 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NgfP01139 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NgfP01139 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NgfP01139 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NgfP01139 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms