Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.42■□□□□ 0.22
Hcn1O88704 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hcn1O88704 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hcn1O88704 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Gm42545-201ENSMUST00000202755 922 ntBASIC16.41■□□□□ 0.22
Hcn1O88704 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hcn1O88704 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hcn1O88704 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hcn1O88704 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hcn1O88704 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.4■□□□□ 0.22
Hcn1O88704 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hcn1O88704 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.4■□□□□ 0.22
Hcn1O88704 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.4■□□□□ 0.22
Hcn1O88704 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn1O88704 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hcn1O88704 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Hcn1O88704 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.39■□□□□ 0.21
Hcn1O88704 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.39■□□□□ 0.21
Hcn1O88704 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.39■□□□□ 0.21
Hcn1O88704 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.39■□□□□ 0.21
Hcn1O88704 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.39■□□□□ 0.21
Hcn1O88704 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.39■□□□□ 0.21
Hcn1O88704 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.39■□□□□ 0.21
Hcn1O88704 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn1O88704 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.39■□□□□ 0.21
Hcn1O88704 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.39■□□□□ 0.21
Hcn1O88704 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.39■□□□□ 0.21
Hcn1O88704 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hcn1O88704 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.38■□□□□ 0.21
Hcn1O88704 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hcn1O88704 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.38■□□□□ 0.21
Hcn1O88704 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Gm43183-201ENSMUST00000200632 547 ntBASIC16.38■□□□□ 0.21
Hcn1O88704 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Hcn1O88704 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.38■□□□□ 0.21
Hcn1O88704 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.38■□□□□ 0.21
Hcn1O88704 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.38■□□□□ 0.21
Hcn1O88704 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn1O88704 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.37■□□□□ 0.21
Hcn1O88704 Gm6576-201ENSMUST00000169678 883 ntBASIC16.37■□□□□ 0.21
Hcn1O88704 Gm10252-201ENSMUST00000209541 832 ntBASIC16.37■□□□□ 0.21
Hcn1O88704 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hcn1O88704 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hcn1O88704 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn1O88704 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms