Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Slc28a2O88627 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.29■□□□□ 0.04
Slc28a2O88627 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Gm4968-201ENSMUST00000071458 858 ntBASIC15.29■□□□□ 0.04
Slc28a2O88627 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc28a2O88627 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc28a2O88627 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc28a2O88627 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc28a2O88627 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc28a2O88627 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc28a2O88627 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.28■□□□□ 0.04
Slc28a2O88627 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.28■□□□□ 0.04
Slc28a2O88627 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.28■□□□□ 0.04
Slc28a2O88627 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc28a2O88627 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc28a2O88627 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc28a2O88627 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc28a2O88627 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Slc28a2O88627 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc28a2O88627 Haglr-201ENSMUST00000100000 2085 ntBASIC15.28■□□□□ 0.04
Slc28a2O88627 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.27■□□□□ 0.04
Slc28a2O88627 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc28a2O88627 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc28a2O88627 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc28a2O88627 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.27■□□□□ 0.03
Slc28a2O88627 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc28a2O88627 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.27■□□□□ 0.03
Slc28a2O88627 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc28a2O88627 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc28a2O88627 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc28a2O88627 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Slc28a2O88627 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.26■□□□□ 0.03
Slc28a2O88627 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.26■□□□□ 0.03
Slc28a2O88627 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc28a2O88627 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.26■□□□□ 0.03
Slc28a2O88627 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Slc28a2O88627 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc28a2O88627 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Slc28a2O88627 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Slc28a2O88627 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Slc28a2O88627 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc28a2O88627 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Slc28a2O88627 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Slc28a2O88627 Gm11927-201ENSMUST00000118472 759 ntBASIC15.25■□□□□ 0.03
Slc28a2O88627 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.25■□□□□ 0.03
Slc28a2O88627 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc28a2O88627 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc28a2O88627 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.24■□□□□ 0.03
Slc28a2O88627 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.24■□□□□ 0.03
Slc28a2O88627 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc28a2O88627 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc28a2O88627 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slc28a2O88627 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms