Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Mir1668-201ENSMUST00000184114 107 ntBASIC14.7□□□□□ -0.06
Cldn1O88551 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.7□□□□□ -0.06
Cldn1O88551 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cldn1O88551 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cldn1O88551 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.69□□□□□ -0.06
Cldn1O88551 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cldn1O88551 Gm24589-201ENSMUST00000116692 94 ntBASIC14.69□□□□□ -0.06
Cldn1O88551 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.69□□□□□ -0.06
Cldn1O88551 Mir3081-201ENSMUST00000175305 84 ntBASIC14.69□□□□□ -0.06
Cldn1O88551 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.69□□□□□ -0.06
Cldn1O88551 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.69□□□□□ -0.06
Cldn1O88551 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cldn1O88551 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cldn1O88551 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cldn1O88551 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cldn1O88551 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cldn1O88551 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cldn1O88551 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.68□□□□□ -0.06
Cldn1O88551 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cldn1O88551 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Gm18958-201ENSMUST00000174258 762 ntBASIC14.68□□□□□ -0.06
Cldn1O88551 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.68□□□□□ -0.06
Cldn1O88551 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.68□□□□□ -0.06
Cldn1O88551 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Cldn1O88551 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cldn1O88551 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cldn1O88551 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cldn1O88551 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cldn1O88551 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.67□□□□□ -0.06
Cldn1O88551 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cldn1O88551 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cldn1O88551 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cldn1O88551 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.67□□□□□ -0.06
Cldn1O88551 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cldn1O88551 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Cldn1O88551 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldn1O88551 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cldn1O88551 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.66□□□□□ -0.06
Cldn1O88551 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cldn1O88551 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.66□□□□□ -0.06
Cldn1O88551 Gm7213-201ENSMUST00000215977 950 ntBASIC14.66□□□□□ -0.06
Cldn1O88551 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cldn1O88551 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Cldn1O88551 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms