Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc4a4O88343 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc4a4O88343 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Slc4a4O88343 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc4a4O88343 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Slc4a4O88343 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc4a4O88343 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc4a4O88343 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Slc4a4O88343 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc4a4O88343 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc4a4O88343 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Gm10013-201ENSMUST00000106074 672 ntBASIC20.23■□□□□ 0.83
Slc4a4O88343 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Gm6659-201ENSMUST00000174752 547 ntBASIC20.23■□□□□ 0.83
Slc4a4O88343 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc4a4O88343 Gm18101-201ENSMUST00000215769 548 ntBASIC20.23■□□□□ 0.83
Slc4a4O88343 Gm7213-201ENSMUST00000215977 950 ntBASIC20.23■□□□□ 0.83
Slc4a4O88343 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Slc4a4O88343 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc4a4O88343 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slc4a4O88343 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slc4a4O88343 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.22■□□□□ 0.83
Slc4a4O88343 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.22■□□□□ 0.83
Slc4a4O88343 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc4a4O88343 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.22■□□□□ 0.83
Slc4a4O88343 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.22■□□□□ 0.83
Slc4a4O88343 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc4a4O88343 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc4a4O88343 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc4a4O88343 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc4a4O88343 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc4a4O88343 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc4a4O88343 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc4a4O88343 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Slc4a4O88343 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc4a4O88343 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc4a4O88343 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.21■□□□□ 0.83
Slc4a4O88343 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Slc4a4O88343 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc4a4O88343 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Slc4a4O88343 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Slc4a4O88343 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.2■□□□□ 0.82
Slc4a4O88343 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Slc4a4O88343 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.2■□□□□ 0.82
Slc4a4O88343 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Slc4a4O88343 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc4a4O88343 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Slc4a4O88343 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.19■□□□□ 0.82
Slc4a4O88343 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Slc4a4O88343 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Mir1668-201ENSMUST00000184114 107 ntBASIC20.19■□□□□ 0.82
Slc4a4O88343 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.19■□□□□ 0.82
Slc4a4O88343 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.19■□□□□ 0.82
Slc4a4O88343 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Slc4a4O88343 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms