Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.81■□□□□ 0.44
Cldn5O54942 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cldn5O54942 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cldn5O54942 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cldn5O54942 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cldn5O54942 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldn5O54942 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.8■□□□□ 0.44
Cldn5O54942 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldn5O54942 Gm18958-201ENSMUST00000174258 762 ntBASIC17.8■□□□□ 0.44
Cldn5O54942 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cldn5O54942 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldn5O54942 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldn5O54942 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldn5O54942 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Cldn5O54942 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn5O54942 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cldn5O54942 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn5O54942 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cldn5O54942 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cldn5O54942 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Cldn5O54942 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.79■□□□□ 0.44
Cldn5O54942 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.79■□□□□ 0.44
Cldn5O54942 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.79■□□□□ 0.44
Cldn5O54942 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn5O54942 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.79■□□□□ 0.44
Cldn5O54942 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cldn5O54942 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn5O54942 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.78■□□□□ 0.44
Cldn5O54942 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Gm21559-201ENSMUST00000220638 855 ntBASIC17.78■□□□□ 0.44
Cldn5O54942 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Gm8587-201ENSMUST00000076538 843 ntBASIC17.78■□□□□ 0.44
Cldn5O54942 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn5O54942 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cldn5O54942 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cldn5O54942 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cldn5O54942 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.77■□□□□ 0.44
Cldn5O54942 Mir1668-201ENSMUST00000184114 107 ntBASIC17.77■□□□□ 0.44
Cldn5O54942 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cldn5O54942 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn5O54942 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Cldn5O54942 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn5O54942 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.77■□□□□ 0.43
Cldn5O54942 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn5O54942 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn5O54942 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn5O54942 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms