Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Npc1O35604 Idnk-204ENSMUST00000226010 1898 ntBASIC16.76■□□□□ 0.27
Npc1O35604 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Npc1O35604 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Npc1O35604 Gm13559-201ENSMUST00000120476 863 ntBASIC16.75■□□□□ 0.27
Npc1O35604 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Npc1O35604 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.75■□□□□ 0.27
Npc1O35604 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Npc1O35604 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Npc1O35604 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.74■□□□□ 0.27
Npc1O35604 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Gm37025-201ENSMUST00000195159 829 ntBASIC16.74■□□□□ 0.27
Npc1O35604 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.74■□□□□ 0.27
Npc1O35604 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Npc1O35604 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Npc1O35604 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Npc1O35604 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.74■□□□□ 0.27
Npc1O35604 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.74■□□□□ 0.27
Npc1O35604 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Npc1O35604 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npc1O35604 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Npc1O35604 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Npc1O35604 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Npc1O35604 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Npc1O35604 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.73■□□□□ 0.27
Npc1O35604 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.73■□□□□ 0.27
Npc1O35604 Gm11539-201ENSMUST00000119837 557 ntBASIC16.73■□□□□ 0.27
Npc1O35604 Gm13436-201ENSMUST00000120418 567 ntBASIC16.73■□□□□ 0.27
Npc1O35604 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Npc1O35604 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npc1O35604 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Npc1O35604 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.73■□□□□ 0.27
Npc1O35604 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Npc1O35604 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.72■□□□□ 0.27
Npc1O35604 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Npc1O35604 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.72■□□□□ 0.27
Npc1O35604 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npc1O35604 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.72■□□□□ 0.27
Npc1O35604 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms