Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.32■□□□□ 0.68
Stx1aO35526 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Stx1aO35526 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stx1aO35526 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Stx1aO35526 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stx1aO35526 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stx1aO35526 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Stx1aO35526 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Stx1aO35526 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Stx1aO35526 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Stx1aO35526 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.31■□□□□ 0.68
Stx1aO35526 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stx1aO35526 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.3■□□□□ 0.68
Stx1aO35526 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.3■□□□□ 0.68
Stx1aO35526 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Stx1aO35526 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Stx1aO35526 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Stx1aO35526 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Stx1aO35526 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Stx1aO35526 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stx1aO35526 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Gm10849-201ENSMUST00000100397 618 ntBASIC19.29■□□□□ 0.68
Stx1aO35526 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.29■□□□□ 0.68
Stx1aO35526 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Mir6349-201ENSMUST00000184059 97 ntBASIC19.29■□□□□ 0.68
Stx1aO35526 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.29■□□□□ 0.68
Stx1aO35526 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Stx1aO35526 Rab3c-203ENSMUST00000224180 967 ntBASIC19.29■□□□□ 0.68
Stx1aO35526 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Stx1aO35526 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.28■□□□□ 0.68
Stx1aO35526 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Stx1aO35526 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.28■□□□□ 0.68
Stx1aO35526 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.28■□□□□ 0.68
Stx1aO35526 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.28■□□□□ 0.68
Stx1aO35526 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Stx1aO35526 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Stx1aO35526 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stx1aO35526 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Stx1aO35526 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.27■□□□□ 0.68
Stx1aO35526 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stx1aO35526 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stx1aO35526 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Stx1aO35526 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Stx1aO35526 Gm13148-201ENSMUST00000118892 745 ntBASIC19.27■□□□□ 0.68
Stx1aO35526 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stx1aO35526 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.27■□□□□ 0.68
Stx1aO35526 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stx1aO35526 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Stx1aO35526 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Stx1aO35526 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.27■□□□□ 0.67
Stx1aO35526 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Stx1aO35526 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stx1aO35526 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms