Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atn1O35126 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atn1O35126 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.77■□□□□ 0.27
Atn1O35126 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.77■□□□□ 0.27
Atn1O35126 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atn1O35126 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atn1O35126 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atn1O35126 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Atn1O35126 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atn1O35126 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Atn1O35126 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Atn1O35126 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atn1O35126 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.75■□□□□ 0.27
Atn1O35126 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Atn1O35126 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.75■□□□□ 0.27
Atn1O35126 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.75■□□□□ 0.27
Atn1O35126 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.75■□□□□ 0.27
Atn1O35126 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.75■□□□□ 0.27
Atn1O35126 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.75■□□□□ 0.27
Atn1O35126 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atn1O35126 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Atn1O35126 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.74■□□□□ 0.27
Atn1O35126 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.74■□□□□ 0.27
Atn1O35126 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atn1O35126 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.74■□□□□ 0.27
Atn1O35126 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.73■□□□□ 0.27
Atn1O35126 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.73■□□□□ 0.27
Atn1O35126 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Atn1O35126 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atn1O35126 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Atn1O35126 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.72■□□□□ 0.27
Atn1O35126 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.72■□□□□ 0.27
Atn1O35126 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.72■□□□□ 0.27
Atn1O35126 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.72■□□□□ 0.27
Atn1O35126 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.72■□□□□ 0.27
Atn1O35126 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Atn1O35126 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.72■□□□□ 0.27
Atn1O35126 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atn1O35126 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms