Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3139J3QK78 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.12■□□□□ 0.33
Gm3139J3QK78 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm3139J3QK78 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm3139J3QK78 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.12■□□□□ 0.33
Gm3139J3QK78 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3139J3QK78 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Gm18032-201ENSMUST00000222541 538 ntBASIC17.11■□□□□ 0.33
Gm3139J3QK78 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3139J3QK78 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.11■□□□□ 0.33
Gm3139J3QK78 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.1■□□□□ 0.33
Gm3139J3QK78 Gm10013-201ENSMUST00000106074 672 ntBASIC17.1■□□□□ 0.33
Gm3139J3QK78 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Gm22697-201ENSMUST00000175194 63 ntBASIC17.1■□□□□ 0.33
Gm3139J3QK78 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Gm18101-201ENSMUST00000215769 548 ntBASIC17.1■□□□□ 0.33
Gm3139J3QK78 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm3139J3QK78 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3139J3QK78 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3139J3QK78 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3139J3QK78 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3139J3QK78 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3139J3QK78 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3139J3QK78 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3139J3QK78 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3139J3QK78 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3139J3QK78 Mir1668-201ENSMUST00000184114 107 ntBASIC17.08■□□□□ 0.32
Gm3139J3QK78 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm3139J3QK78 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3139J3QK78 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3139J3QK78 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Gm7213-201ENSMUST00000215977 950 ntBASIC17.07■□□□□ 0.32
Gm3139J3QK78 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3139J3QK78 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3139J3QK78 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms