Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.58■□□□□ 0.89
NpcdF8VQB8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NpcdF8VQB8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NpcdF8VQB8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NpcdF8VQB8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
NpcdF8VQB8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
NpcdF8VQB8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NpcdF8VQB8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NpcdF8VQB8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NpcdF8VQB8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NpcdF8VQB8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.57■□□□□ 0.88
NpcdF8VQB8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NpcdF8VQB8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NpcdF8VQB8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Gm29791-202ENSMUST00000207888 369 ntBASIC20.56■□□□□ 0.88
NpcdF8VQB8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NpcdF8VQB8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Gm7063-201ENSMUST00000186840 981 ntBASIC20.55■□□□□ 0.88
NpcdF8VQB8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NpcdF8VQB8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.54■□□□□ 0.88
NpcdF8VQB8 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.54■□□□□ 0.88
NpcdF8VQB8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.54■□□□□ 0.88
NpcdF8VQB8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.54■□□□□ 0.88
NpcdF8VQB8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NpcdF8VQB8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NpcdF8VQB8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NpcdF8VQB8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NpcdF8VQB8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NpcdF8VQB8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.52■□□□□ 0.88
NpcdF8VQB8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NpcdF8VQB8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NpcdF8VQB8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms