Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
C530025M09RikF6RGA8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
C530025M09RikF6RGA8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
C530025M09RikF6RGA8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
C530025M09RikF6RGA8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Mir5133-201ENSMUST00000174955 77 ntBASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
C530025M09RikF6RGA8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gm6576-201ENSMUST00000169678 883 ntBASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gm10138-203ENSMUST00000206952 366 ntBASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
C530025M09RikF6RGA8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
C530025M09RikF6RGA8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
C530025M09RikF6RGA8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Shroom3-211ENSMUST00000225438 5742 ntBASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
C530025M09RikF6RGA8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms