Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Gm42642-201ENSMUST00000200683 355 ntBASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.11■□□□□ 0.33
Raph1F2Z3U3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raph1F2Z3U3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raph1F2Z3U3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Raph1F2Z3U3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Gm13216-201ENSMUST00000117145 591 ntBASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raph1F2Z3U3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raph1F2Z3U3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms